A structural alignment kernel for protein structures: Supplementary information

Jian Qiu, Martial Hue, Asa Ben-Hur, Jean-Philippe Vert and William Stafford Noble

Bioinformatics. 23(9):1090-1098, 2007.

Online supplement (PDF)

Sequence files are in fasta format. Structure files are tar files of PDB files. All remaining files are tab-delimited text, with identifiers in the first row and column.

EC benchmark

SCOP benchmark

GO benchmark