Detecting cross-linked peptides by searching against a database of cross-linked peptide pairs

Sean McIlwain, Paul Draghicescu, Pragya Singh, Dave Goodlett and William Stafford Noble

Journal of Proteome Research. 9(5):2488-2495, 2010.

Supplementary data

• the 10 spectra referred to in Table 1
• the collection of 3314 spectra from Singh et al.
• the sequences of proteins CYP2E1 and b5,
• the collection of 35,236 yeast spectra from Kall et al., and
• the sequences of the five randomly selected yeast proteins used in Section 3.4

The search tool is available using the command search-for-xlinks in Crux.

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