Supplement to "A unified multitask architecture for predicting local protein properties"

Yanjun Qi, Merja Oja, Jason Weston and William Stafford Noble

PLoS One. 7(3):e32235, 2012.

Data sets

Task Sequences Labels
Secondary structure ss sequences ss labels
Secondary structure cb513ss sequences cb513ss labels
Secondary structure dssp sequences dssp labels
Relative solvent accessibility sar sequences sar labels
Absolute solvent accessibility saa sequences saa labels
DNA binding dna sequences dna labels
Signal peptide sp sequences sp labels
Transmembrane topology tm sequences tm labels
Coiled coil cc sequences cc labels
Protein-protein interactions tppi sequences tppi labels

All data files in one archive.

Software and trained models