Compare segmentations, Sanger H3K4me1, HeLa, 64kb vs. Sanger H3K4me2, HeLa, 64kb

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3K4me1, HeLa, 64kb Sanger H3K4me2, HeLa, 64kb Number of segments State 0: 88 State 1: 75 Total size (bp) State 0: 17014912 State 1: 12842925 Avg. segment length State 0: 193351 State 1: 171239 Median segment length State 0: 118499 State 1: 125999 Min. segment length State 0: 16999 State 1: 18999 Max. segment length State 0: 998999 State 1: 575999 Number of segments State 0: 95 State 1: 77 Total size (bp) State 0: 18940905 State 1: 10916923 Avg. segment length State 0: 199378 State 1: 141778 Median segment length State 0: 110999 State 1: 108999 Min. segment length State 0: 6999 State 1: 17999 Max. segment length State 0: 1031999 State 1: 629999 Intersection st0 st1 total Total bp 14606912 8508930 23115842 Fraction of SangerChip 0.858477 0.6625383 0.7741968 Fraction of SangerChip 0.7711834 0.7794257 0.774197 SangerChip minus SangerChip st0 st1 total Total bp 4333993 2407993 6741986 Fraction of SangerChip 0.2547173 0.1874957 0.2258029 Fraction of SangerChip 0.2288166 0.2205743 0.2258030 SangerChip minus SangerChip st0 st1 both Total bp 4333993 2407993 6741986 Fraction of SangerChip 0.2547173 0.1874957 0.2258029 Fraction of SangerChip 0.2288166 0.2205743 0.2258030 Symmetric difference st0 st1 Total bp 6741993 6741988 Fraction of SangerChip 0.3962403 0.5249574 Fraction of SangerChip 0.3559488 0.6175722

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.