Compare segmentations, Sanger H3ac, HeLa, 64kb vs. Affy (thresh), H3ac, H3K27me3 (wavelet), Tr50

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3ac, HeLa, 64kb Affy (thresh), H3ac, H3K27me3 (wavelet), Tr50 Number of segments State 0: 69 State 1: 57 Total size (bp) State 0: 17347931 State 1: 12509943 Avg. segment length State 0: 251419 State 1: 219473 Median segment length State 0: 175999 State 1: 127999 Min. segment length State 0: 14999 State 1: 20999 Max. segment length State 0: 1036999 State 1: 737999 Number of segments State 0: 62 State 1: 53 Total size (bp) State 0: 16320938 State 1: 12936947 Avg. segment length State 0: 263241 State 1: 244093 Median segment length State 0: 188999 State 1: 130999 Min. segment length State 0: 16999 State 1: 27999 Max. segment length State 0: 1117999 State 1: 1094999 Intersection st0 st1 total Total bp 15230937 10881947 26112884 Fraction of SangerChip 0.8779685 0.8698638 0.8745728 Fraction of Affy.H3ac.H3K27me3.Tr50 0.9332146 0.8411526 0.8925076 SangerChip minus Affy.H3ac.H3K27me3.Tr50 st0 st1 total Total bp 2116994 1627996 3744990 Fraction of SangerChip 0.1220315 0.1301362 0.1254272 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1297103 0.1258408 0.1279993 Affy.H3ac.H3K27me3.Tr50 minus SangerChip st0 st1 both Total bp 1090001 2055000 3145001 Fraction of SangerChip 0.06283176 0.1642693 0.1053324 Fraction of Affy.H3ac.H3K27me3.Tr50 0.06678544 0.1588474 0.1074924 Symmetric difference st0 st1 Total bp 3206995 3682996 Fraction of SangerChip 0.1848633 0.2944055 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1964958 0.2846882

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.