Compare segmentations, Sanger H3ac, HeLa, 64kb vs. Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet)
Histogram of active state (st1) segment lengths
Individual segmentation statistics
Sanger H3ac, HeLa, 64kb Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet)
- Number of segments
- State 0: 69
- State 1: 57
- Total size (bp)
- State 0: 17347931
- State 1: 12509943
- Avg. segment length
- State 0: 251419
- State 1: 219473
- Median segment length
- State 0: 175999
- State 1: 127999
- Min. segment length
- State 0: 14999
- State 1: 20999
- Max. segment length
- State 0: 1036999
- State 1: 737999
- Number of segments
- State 0: 61
- State 1: 53
- Total size (bp)
- State 0: 16334939
- State 1: 12922947
- Avg. segment length
- State 0: 267786
- State 1: 243829
- Median segment length
- State 0: 175999
- State 1: 140999
- Min. segment length
- State 0: 16999
- State 1: 3999
- Max. segment length
- State 0: 1116999
- State 1: 1099999
Intersection
st0 st1 total Total bp 15277939 10914946 26192885 Fraction of SangerChip 0.8806779 0.8725017 0.8772522 Fraction of Affy.H3ac.H3K27me3.Tr50 0.935292 0.8446174 0.8952419
SangerChip minus Affy.H3ac.H3K27me3.Tr50
st0 st1 total Total bp 2069992 1594997 3664989 Fraction of SangerChip 0.1193221 0.1274983 0.1227478 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1267217 0.1234236 0.125265
Affy.H3ac.H3K27me3.Tr50 minus SangerChip
st0 st1 both Total bp 1057000 2008001 3065001 Fraction of SangerChip 0.06092946 0.1605124 0.1026530 Fraction of Affy.H3ac.H3K27me3.Tr50 0.06470792 0.1553826 0.1047581
Symmetric difference
st0 st1 Total bp 3126992 3602998 Fraction of SangerChip 0.1802516 0.2880107 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1914297 0.2788062 Enrichment of elements
Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.