Compare segmentations, Uva TR50, HeLa vs. MSA non-exonic, 64kb

Histogram of active state (st1) segment lengths

Individual segmentation statistics Uva TR50, HeLa MSA non-exonic, 64kb Number of segments State 0: 48 State 1: 46 Total size (bp) State 0: 16697602 State 1: 12152304 Avg. segment length State 0: 347867 State 1: 264181 Median segment length State 0: 334499 State 1: 180349 Min. segment length State 0: 6699 State 1: 4499 Max. segment length State 0: 1617849 State 1: 746949 Number of segments State 0: 72 State 1: 57 Total size (bp) State 0: 18317635 State 1: 11680425 Avg. segment length State 0: 254412 State 1: 204920 Median segment length State 0: 149000 State 1: 146000 Min. segment length State 0: 22000 State 1: 14000 Max. segment length State 0: 1353000 State 1: 1000000 Intersection st0 st1 total Total bp 10748227 5699618 16447845 Fraction of UvaDnaRepTr50 0.6436988 0.4690154 0.5701178 Fraction of MSA 0.5867694 0.4879632 0.548297 UvaDnaRepTr50 minus MSA st0 st1 total Total bp 5949375 6452686 12402061 Fraction of UvaDnaRepTr50 0.3563012 0.5309846 0.4298822 Fraction of MSA 0.3247895 0.5524359 0.4134288 MSA minus UvaDnaRepTr50 st0 st1 both Total bp 7569408 5980807 13550215 Fraction of UvaDnaRepTr50 0.4533231 0.4921542 0.4696797 Fraction of MSA 0.4132306 0.5120368 0.451703 Symmetric difference st0 st1 Total bp 13518783 12433493 Fraction of UvaDnaRepTr50 0.8096242 1.023139 Fraction of MSA 0.7380201 1.064473

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.