Compare segmentations, Sanger H3K4me1, HeLa vs. Sanger H3K4me1, GM06990

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3K4me1, HeLa Sanger H3K4me1, GM06990 Number of segments State 0: 81 State 1: 66 Total size (bp) State 0: 17339919 State 1: 12502934 Avg. segment length State 0: 214073 State 1: 189438 Median segment length State 0: 151999 State 1: 120999 Min. segment length State 0: 11999 State 1: 27999 Max. segment length State 0: 846999 State 1: 930999 Number of segments State 0: 88 State 1: 75 Total size (bp) State 0: 17014912 State 1: 12842925 Avg. segment length State 0: 193351 State 1: 171239 Median segment length State 0: 118499 State 1: 125999 Min. segment length State 0: 16999 State 1: 18999 Max. segment length State 0: 998999 State 1: 575999 Intersection st0 st1 total Total bp 12522551 8025747 20548298 Fraction of GM 0.7221805 0.6419091 0.68855 Fraction of HeLa 0.735975 0.6249158 0.6882045 GM minus HeLa st0 st1 total Total bp 4817368 4477187 9294555 Fraction of GM 0.2778195 0.3580909 0.3114499 Fraction of HeLa 0.2831262 0.3486112 0.3112936 HeLa minus GM st0 st1 both Total bp 4492361 4817178 9309539 Fraction of GM 0.2590762 0.3852838 0.3119520 Fraction of HeLa 0.2640249 0.3750842 0.3117955 Symmetric difference st0 st1 Total bp 9309729 9294365 Fraction of GM 0.5368958 0.7433747 Fraction of HeLa 0.5471512 0.7236953

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.