*.cmake
*.gz
*.swp
CMakeCache.txt
CMakeFiles
Makefile
bullseye.html
sort-by-column.html
stat-column.html
comet.html
get-ms2-spectrum.html
spectral-counts.html
create-docs.html
extract-rows.html
hardklor.html
percolator.html
xlink-assign-ions.html
assign-confidence.html
q-ranker.html
extract-columns.html
tide-search.html
subtract-index.html
search-for-xlinks.html
make-pin.html
read-tide-index.html
generate-peptides.html
pipeline.html
psm-convert.html
print-processed-spectra.html
barista.html
cascade-search.html
predict-peptide-ions.html
xlink-score-spectrum.html
param-table.html
default.params
