Introduction to Computational Molecular Biology

GENOME 541
Department of Genome Sciences
University of Washington
Spring Quarter, 2014


Course description:

Instructional staff

Please click on the links above for email addresses and office locations.

Meeting times and locations

Prerequisites

Course materials

Course requirements

Examinations

Course grade

Home page

Class schedule

Date            Instructor Topic References Homework
Assigned
Tue Apr 1 Noble Predicting protein function from heterogeneous data (Noble 2006)  
Thu Apr 3 Noble Predicting protein function from heterogeneous data (Brown et al. 2000) (Ramaswamy et al. 2001) (Lanckriet et al. 2004) Homework #1
Tue Apr 8 Borenstein Complex biological networks    
Thu Apr 10 Borenstein Complex biological networks   Homework #2
Tue Apr 15 Ruzzo Non-coding RNA    
Thu Apr 17 Ruzzo Non-coding RNA   Homework #3
Tue Apr 22 Noble Motif discovery    
Thu Apr 24 Noble Protein identification from tandem mass spectra   Homework #4
Tue Apr 29 Bloom Molecular evolution    
Thu May 1 Bloom Molecular evolution   Homework #5
Tue May 6 Bloom Phylogenetic inference    
Thu May 8 Bloom Phylogenetic inference   Homework #6
Tue May 13 Bradley Protein structure    
Thu May 15 Bradley Protein sequence analysis   Homework #7
Tue May 20 Bradley Molecular modeling    
Thu May 22 Bradley Nucleic acid structure   Homework #8
Tue May 27 Lee Reconstructing the transcriptional regulatory network I    
Thu May 29 Lee Reconstructing the transcriptional regulatory network II   Homework #9
Tue Jun 1 Lee Statistical genetics I (Genome-wide association studies)    
Thu Jun 3 Lee Statistical genetics II (Haplotype reconstruction)   Homework #10