%%%% Copyright 2008 University of Washington %%%% % ------------------------------------------------------------------------- % aa : this variable is the observed amino acid (mapped to an integer) % and is chosen according to the current emitClass ... variable: aa { type: discrete observed 0:0 cardinality AA_CARD; weight: scale WEIGHT_aa; switchingparents: nil; conditionalparents: emitClass(0) using DenseCPT("aaEmitByClass_CPT"); } % -------------------------------------------------------------------------