Compare segmentations, Sanger H3K4me2, GM, 2kb smooth vs. Sanger H3K4me2, GM, 64kb smooth

Histogram of active state (st1) segment lengths

Individual segmentation statistics

Sanger H3K4me2, GM, 2kb smooth Sanger H3K4me2, GM, 64kb smooth
  • Number of segments
    • State 0: 801
    • State 1: 771
  • Total size (bp)
    • State 0: 21611199
    • State 1: 8224229
  • Avg. segment length
    • State 0: 26980
    • State 1: 10667
  • Median segment length
    • State 0: 8999
    • State 1: 5999
  • Min. segment length
    • State 0: 999
    • State 1: 999
  • Max. segment length
    • State 0: 498999
    • State 1: 103999
  • Number of segments
    • State 0: 81
    • State 1: 73
  • Total size (bp)
    • State 0: 13554919
    • State 1: 16281927
  • Avg. segment length
    • State 0: 167345
    • State 1: 223040
  • Median segment length
    • State 0: 103999
    • State 1: 203999
  • Min. segment length
    • State 0: 13999
    • State 1: 7999
  • Max. segment length
    • State 0: 818999
    • State 1: 944999

Intersection

st0 st1 total
Total bp 13133838 7803311 20937149
Fraction of smooth2000 0.607733 0.9488198 0.7017546
Fraction of smooth64000 0.9689352 0.4792621 0.7017213

smooth2000 minus smooth64000

st0 st1 total
Total bp 8477361 420918 8898279
Fraction of smooth2000 0.392267 0.05118024 0.2982454
Fraction of smooth64000 0.6254085 0.02585185 0.2982312

smooth64000 minus smooth2000

st0 st1 both
Total bp 421081 8478616 8899697
Fraction of smooth2000 0.01948439 1.030931 0.2982929
Fraction of smooth64000 0.03106481 0.5207379 0.2982787

Symmetric difference

st0 st1
Total bp 8898442 8899534
Fraction of smooth2000 0.4117514 1.082112
Fraction of smooth64000 0.6564733 0.5465897

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.