Compare segmentations, Uva TR50, HeLa (switched states!) vs. Affy (thresh), H3ac, H3K27me3, Tr50

Histogram of active state (st1) segment lengths

Individual segmentation statistics Uva TR50, HeLa (switched states!) Affy (thresh), H3ac, H3K27me3, Tr50 Number of segments State 0: 46 State 1: 48 Total size (bp) State 0: 12152304 State 1: 16697602 Avg. segment length State 0: 264181 State 1: 347867 Median segment length State 0: 180349 State 1: 334499 Min. segment length State 0: 4499 State 1: 6699 Max. segment length State 0: 746949 State 1: 1617849 Number of segments State 0: 62 State 1: 53 Total size (bp) State 0: 16320938 State 1: 12936947 Avg. segment length State 0: 263241 State 1: 244093 Median segment length State 0: 188999 State 1: 130999 Min. segment length State 0: 16999 State 1: 27999 Max. segment length State 0: 1117999 State 1: 1094999 Intersection st0 st1 total Total bp 10672057 11236112 21908169 Fraction of UvaDnaRep 0.878192 0.6729177 0.7593844 Fraction of Affy.H3ac.H3K27me3.Tr50 0.6538875 0.8685289 0.7487954 UvaDnaRep minus Affy.H3ac.H3K27me3.Tr50 st0 st1 total Total bp 1480247 5461490 6941737 Fraction of UvaDnaRep 0.1218079 0.3270823 0.2406156 Fraction of Affy.H3ac.H3K27me3.Tr50 0.0906962 0.4221622 0.2372604 Affy.H3ac.H3K27me3.Tr50 minus UvaDnaRep st0 st1 both Total bp 5648881 1700835 7349716 Fraction of UvaDnaRep 0.4648403 0.1018610 0.254757 Fraction of Affy.H3ac.H3K27me3.Tr50 0.3461125 0.1314711 0.2512046 Symmetric difference st0 st1 Total bp 7129128 7162325 Fraction of UvaDnaRep 0.5866483 0.4289433 Fraction of Affy.H3ac.H3K27me3.Tr50 0.4368087 0.5536333

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.