Compare segmentations, Uva TR50, HeLa vs. UCSD Chip H3K27me3, HeLa, 64kb

Histogram of active state (st1) segment lengths

Individual segmentation statistics Uva TR50, HeLa UCSD Chip H3K27me3, HeLa, 64kb Number of segments State 0: 48 State 1: 46 Total size (bp) State 0: 16697602 State 1: 12152304 Avg. segment length State 0: 347867 State 1: 264181 Median segment length State 0: 334499 State 1: 180349 Min. segment length State 0: 6699 State 1: 4499 Max. segment length State 0: 1617849 State 1: 746949 Number of segments State 0: 59 State 1: 50 Total size (bp) State 0: 18907441 State 1: 10964950 Avg. segment length State 0: 320465 State 1: 219299 Median segment length State 0: 305499 State 1: 152249 Min. segment length State 0: 16999 State 1: 16999 Max. segment length State 0: 1610499 State 1: 661999 Intersection st0 st1 total Total bp 13301681 6809998 20111679 Fraction of UvaDnaRepTr50 0.7966222 0.5603874 0.6971142 Fraction of UcsdChip 0.7035157 0.6210697 0.6732531 UvaDnaRepTr50 minus UcsdChip st0 st1 total Total bp 3395921 5342306 8738227 Fraction of UvaDnaRepTr50 0.2033778 0.4396126 0.3028858 Fraction of UcsdChip 0.1796076 0.4872166 0.2925185 UcsdChip minus UvaDnaRepTr50 st0 st1 both Total bp 5605760 4154952 9760712 Fraction of UvaDnaRepTr50 0.3357225 0.3419065 0.3383273 Fraction of UcsdChip 0.2964843 0.3789303 0.3267469 Symmetric difference st0 st1 Total bp 9001681 9497258 Fraction of UvaDnaRepTr50 0.5391002 0.7815191 Fraction of UcsdChip 0.476092 0.866147

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.