Compare segmentations, Sanger H4ac, HeLa, 64kb vs. UCSD Chip H3K27me3, HeLa, 64kb (switched states!)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H4ac, HeLa, 64kb UCSD Chip H3K27me3, HeLa, 64kb (switched states!) Number of segments State 0: 61 State 1: 55 Total size (bp) State 0: 16279939 State 1: 13577945 Avg. segment length State 0: 266884 State 1: 246872 Median segment length State 0: 183999 State 1: 183999 Min. segment length State 0: 22999 State 1: 999 Max. segment length State 0: 998999 State 1: 899999 Number of segments State 0: 50 State 1: 59 Total size (bp) State 0: 10964950 State 1: 18907441 Avg. segment length State 0: 219299 State 1: 320465 Median segment length State 0: 152249 State 1: 305499 Min. segment length State 0: 16999 State 1: 16999 Max. segment length State 0: 661999 State 1: 1610499 Intersection st0 st1 total Total bp 8056012 10671320 18727332 Fraction of SangerChip 0.4948429 0.7859304 0.6272156 Fraction of UcsdChip 0.7347058 0.5643979 0.626911 SangerChip minus UcsdChip st0 st1 total Total bp 8223927 2906625 11130552 Fraction of SangerChip 0.5051571 0.2140696 0.3727844 Fraction of UcsdChip 0.7500196 0.1537292 0.3726033 UcsdChip minus SangerChip st0 st1 both Total bp 2908938 8236121 11145059 Fraction of SangerChip 0.1786824 0.6065808 0.3732702 Fraction of UcsdChip 0.2652942 0.4356021 0.3730890 Symmetric difference st0 st1 Total bp 11132865 11142746 Fraction of SangerChip 0.6838395 0.8206504 Fraction of UcsdChip 1.015314 0.5893313

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.