Compare segmentations, Sanger H3K4me3, HeLa, 64kb vs. Sanger H3K4me2, HeLa, 64kb

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3K4me3, HeLa, 64kb Sanger H3K4me2, HeLa, 64kb Number of segments State 0: 101 State 1: 82 Total size (bp) State 0: 20489899 State 1: 9367918 Avg. segment length State 0: 202870 State 1: 114243 Median segment length State 0: 122999 State 1: 99999 Min. segment length State 0: 8999 State 1: 13999 Max. segment length State 0: 1038999 State 1: 423999 Number of segments State 0: 95 State 1: 77 Total size (bp) State 0: 18940905 State 1: 10916923 Avg. segment length State 0: 199378 State 1: 141778 Median segment length State 0: 110999 State 1: 108999 Min. segment length State 0: 6999 State 1: 17999 Max. segment length State 0: 1031999 State 1: 629999 Intersection st0 st1 total Total bp 17793899 8220928 26014827 Fraction of SangerChip 0.868423 0.8775619 0.8712903 Fraction of SangerChip 0.939443 0.7530444 0.87129 SangerChip minus SangerChip st0 st1 total Total bp 1147006 2695995 3843001 Fraction of SangerChip 0.0559791 0.2877902 0.1287100 Fraction of SangerChip 0.06055709 0.2469556 0.12871 SangerChip minus SangerChip st0 st1 both Total bp 1147006 2695995 3843001 Fraction of SangerChip 0.0559791 0.2877902 0.1287100 Fraction of SangerChip 0.06055709 0.2469556 0.12871 Symmetric difference st0 st1 Total bp 3843006 3842985 Fraction of SangerChip 0.1875561 0.4102283 Fraction of SangerChip 0.2028945 0.3520209

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.