Compare segmentations, Sanger H3K4me1, HeLa, 64kb vs. Sanger H3K4me3, HeLa, 64kb

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3K4me1, HeLa, 64kb Sanger H3K4me3, HeLa, 64kb Number of segments State 0: 88 State 1: 75 Total size (bp) State 0: 17014912 State 1: 12842925 Avg. segment length State 0: 193351 State 1: 171239 Median segment length State 0: 118499 State 1: 125999 Min. segment length State 0: 16999 State 1: 18999 Max. segment length State 0: 998999 State 1: 575999 Number of segments State 0: 101 State 1: 82 Total size (bp) State 0: 20489899 State 1: 9367918 Avg. segment length State 0: 202870 State 1: 114243 Median segment length State 0: 122999 State 1: 99999 Min. segment length State 0: 8999 State 1: 13999 Max. segment length State 0: 1038999 State 1: 423999 Intersection st0 st1 total Total bp 13966907 6319933 20286840 Fraction of SangerChip 0.8208627 0.4920945 0.6794477 Fraction of SangerChip 0.6816484 0.6746358 0.6794482 SangerChip minus SangerChip st0 st1 total Total bp 6522992 3047985 9570977 Fraction of SangerChip 0.3833691 0.2373279 0.3205516 Fraction of SangerChip 0.3183516 0.3253642 0.3205518 SangerChip minus SangerChip st0 st1 both Total bp 6522992 3047985 9570977 Fraction of SangerChip 0.3833691 0.2373279 0.3205516 Fraction of SangerChip 0.3183516 0.3253642 0.3205518 Symmetric difference st0 st1 Total bp 9570997 9570977 Fraction of SangerChip 0.5625064 0.7452334 Fraction of SangerChip 0.4671081 1.021676

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.