Compare segmentations, Sanger H4ac, HeLa, 64kb vs. MSA non-exonic 3kb sliding window, 64kb (switched states!)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H4ac, HeLa, 64kb MSA non-exonic 3kb sliding window, 64kb (switched states!) Number of segments State 0: 61 State 1: 55 Total size (bp) State 0: 16279939 State 1: 13577945 Avg. segment length State 0: 266884 State 1: 246872 Median segment length State 0: 183999 State 1: 183999 Min. segment length State 0: 22999 State 1: 999 Max. segment length State 0: 998999 State 1: 899999 Number of segments State 0: 57 State 1: 72 Total size (bp) State 0: 11680425 State 1: 18317635 Avg. segment length State 0: 204920 State 1: 254412 Median segment length State 0: 146000 State 1: 149000 Min. segment length State 0: 14000 State 1: 22000 Max. segment length State 0: 1000000 State 1: 1353000 Intersection st0 st1 total Total bp 8192931 10121216 18314147 Fraction of SangerChip 0.5032532 0.7454159 0.6133773 Fraction of MSA 0.701424 0.5525395 0.610511 SangerChip minus MSA st0 st1 total Total bp 8087008 3456729 11543737 Fraction of SangerChip 0.4967468 0.2545841 0.3866227 Fraction of MSA 0.6923556 0.1887104 0.3848161 MSA minus SangerChip st0 st1 both Total bp 3487494 8196419 11683913 Fraction of SangerChip 0.2142203 0.6036568 0.3913175 Fraction of MSA 0.2985760 0.4474605 0.3894890 Symmetric difference st0 st1 Total bp 11574502 11653148 Fraction of SangerChip 0.7109672 0.858241 Fraction of MSA 0.9909316 0.636171

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.