Compare segmentations, Sanger H3K4me3, HeLa, 64kb vs. MSA non-exonic 3kb sliding window, 64kb (switched states!)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3K4me3, HeLa, 64kb MSA non-exonic 3kb sliding window, 64kb (switched states!) Number of segments State 0: 101 State 1: 82 Total size (bp) State 0: 20489899 State 1: 9367918 Avg. segment length State 0: 202870 State 1: 114243 Median segment length State 0: 122999 State 1: 99999 Min. segment length State 0: 8999 State 1: 13999 Max. segment length State 0: 1038999 State 1: 423999 Number of segments State 0: 57 State 1: 72 Total size (bp) State 0: 11680425 State 1: 18317635 Avg. segment length State 0: 204920 State 1: 254412 Median segment length State 0: 146000 State 1: 149000 Min. segment length State 0: 14000 State 1: 22000 Max. segment length State 0: 1000000 State 1: 1353000 Intersection st0 st1 total Total bp 9048736 6767146 15815882 Fraction of SangerChip 0.4416194 0.7223746 0.5297066 Fraction of MSA 0.7746924 0.3694334 0.5272302 SangerChip minus MSA st0 st1 total Total bp 11441163 2600772 14041935 Fraction of SangerChip 0.5583806 0.2776254 0.4702934 Fraction of MSA 0.979516 0.1419819 0.4680948 MSA minus SangerChip st0 st1 both Total bp 2631689 11550489 14182178 Fraction of SangerChip 0.1284384 1.232984 0.4749905 Fraction of MSA 0.2253076 0.6305666 0.4727698 Symmetric difference st0 st1 Total bp 14072852 14151261 Fraction of SangerChip 0.686819 1.510609 Fraction of MSA 1.204824 0.7725485

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.