Compare segmentations, Sanger H4ac, HeLa, 64kb vs. AffyRnaSignal, 51.2kb (thresholded)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H4ac, HeLa, 64kb AffyRnaSignal, 51.2kb (thresholded) Number of segments State 0: 61 State 1: 55 Total size (bp) State 0: 16279939 State 1: 13577945 Avg. segment length State 0: 266884 State 1: 246872 Median segment length State 0: 183999 State 1: 183999 Min. segment length State 0: 22999 State 1: 999 Max. segment length State 0: 998999 State 1: 899999 Number of segments State 0: 95 State 1: 86 Total size (bp) State 0: 17082205 State 1: 12275464 Avg. segment length State 0: 179813 State 1: 142738 Median segment length State 0: 111399 State 1: 84099 Min. segment length State 0: 10799 State 1: 749 Max. segment length State 0: 1124499 State 1: 680149 Intersection st0 st1 total Total bp 12732399 8924130 21656529 Fraction of SangerChip 0.7820913 0.6572519 0.7253203 Fraction of AffyRnaSignal 0.7453604 0.7269892 0.7376788 SangerChip minus AffyRnaSignal st0 st1 total Total bp 3547540 4653815 8201355 Fraction of SangerChip 0.2179087 0.3427481 0.2746797 Fraction of AffyRnaSignal 0.2076746 0.3791152 0.2793599 AffyRnaSignal minus SangerChip st0 st1 both Total bp 4349806 3351334 7701140 Fraction of SangerChip 0.2671881 0.2468219 0.2579265 Fraction of AffyRnaSignal 0.2546396 0.2730108 0.2623212 Symmetric difference st0 st1 Total bp 7897346 8005149 Fraction of SangerChip 0.4850968 0.58957 Fraction of AffyRnaSignal 0.4623142 0.652126

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.