Compare segmentations, Sanger H3ac, HeLa, 64kb vs. AffyRnaSignal, 51.2kb (thresholded)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3ac, HeLa, 64kb AffyRnaSignal, 51.2kb (thresholded) Number of segments State 0: 69 State 1: 57 Total size (bp) State 0: 17347931 State 1: 12509943 Avg. segment length State 0: 251419 State 1: 219473 Median segment length State 0: 175999 State 1: 127999 Min. segment length State 0: 14999 State 1: 20999 Max. segment length State 0: 1036999 State 1: 737999 Number of segments State 0: 95 State 1: 86 Total size (bp) State 0: 17082205 State 1: 12275464 Avg. segment length State 0: 179813 State 1: 142738 Median segment length State 0: 111399 State 1: 84099 Min. segment length State 0: 10799 State 1: 749 Max. segment length State 0: 1124499 State 1: 680149 Intersection st0 st1 total Total bp 13512144 8650730 22162874 Fraction of SangerChip 0.7788908 0.6915083 0.742279 Fraction of AffyRnaSignal 0.791007 0.7047171 0.7549262 SangerChip minus AffyRnaSignal st0 st1 total Total bp 3835787 3859213 7695000 Fraction of SangerChip 0.2211092 0.3084917 0.2577210 Fraction of AffyRnaSignal 0.2245487 0.3143843 0.2621121 AffyRnaSignal minus SangerChip st0 st1 both Total bp 3570061 3624734 7194795 Fraction of SangerChip 0.2057917 0.2897482 0.2409681 Fraction of AffyRnaSignal 0.208993 0.2952829 0.2450738 Symmetric difference st0 st1 Total bp 7405848 7483947 Fraction of SangerChip 0.4269009 0.5982399 Fraction of AffyRnaSignal 0.4335417 0.6096671

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.