Compare segmentations, Sanger H3K4me2, HeLa, 64kb vs. AffyRnaSignal, 51.2kb (thresholded)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3K4me2, HeLa, 64kb AffyRnaSignal, 51.2kb (thresholded) Number of segments State 0: 95 State 1: 77 Total size (bp) State 0: 18940905 State 1: 10916923 Avg. segment length State 0: 199378 State 1: 141778 Median segment length State 0: 110999 State 1: 108999 Min. segment length State 0: 6999 State 1: 17999 Max. segment length State 0: 1031999 State 1: 629999 Number of segments State 0: 95 State 1: 86 Total size (bp) State 0: 17082205 State 1: 12275464 Avg. segment length State 0: 179813 State 1: 142738 Median segment length State 0: 111399 State 1: 84099 Min. segment length State 0: 10799 State 1: 749 Max. segment length State 0: 1124499 State 1: 680149 Intersection st0 st1 total Total bp 13733089 7333058 21066147 Fraction of SangerChip 0.7250493 0.6717147 0.7055485 Fraction of AffyRnaSignal 0.8039412 0.5973752 0.7175688 SangerChip minus AffyRnaSignal st0 st1 total Total bp 5207816 3583865 8791681 Fraction of SangerChip 0.2749507 0.3282853 0.2944515 Fraction of AffyRnaSignal 0.3048679 0.2919535 0.2994680 AffyRnaSignal minus SangerChip st0 st1 both Total bp 3349116 4942406 8291522 Fraction of SangerChip 0.1768192 0.4527289 0.2777001 Fraction of AffyRnaSignal 0.1960588 0.4026248 0.2824312 Symmetric difference st0 st1 Total bp 8556932 8526271 Fraction of SangerChip 0.45177 0.7810141 Fraction of AffyRnaSignal 0.5009267 0.6945783

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.