Compare segmentations, Sanger H3ac, HeLa, 64kb vs. Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3ac, HeLa, 64kb Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet) Number of segments State 0: 69 State 1: 57 Total size (bp) State 0: 17347931 State 1: 12509943 Avg. segment length State 0: 251419 State 1: 219473 Median segment length State 0: 175999 State 1: 127999 Min. segment length State 0: 14999 State 1: 20999 Max. segment length State 0: 1036999 State 1: 737999 Number of segments State 0: 61 State 1: 53 Total size (bp) State 0: 16334939 State 1: 12922947 Avg. segment length State 0: 267786 State 1: 243829 Median segment length State 0: 175999 State 1: 140999 Min. segment length State 0: 16999 State 1: 3999 Max. segment length State 0: 1116999 State 1: 1099999 Intersection st0 st1 total Total bp 15277939 10914946 26192885 Fraction of SangerChip 0.8806779 0.8725017 0.8772522 Fraction of Affy.H3ac.H3K27me3.Tr50 0.935292 0.8446174 0.8952419 SangerChip minus Affy.H3ac.H3K27me3.Tr50 st0 st1 total Total bp 2069992 1594997 3664989 Fraction of SangerChip 0.1193221 0.1274983 0.1227478 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1267217 0.1234236 0.125265 Affy.H3ac.H3K27me3.Tr50 minus SangerChip st0 st1 both Total bp 1057000 2008001 3065001 Fraction of SangerChip 0.06092946 0.1605124 0.1026530 Fraction of Affy.H3ac.H3K27me3.Tr50 0.06470792 0.1553826 0.1047581 Symmetric difference st0 st1 Total bp 3126992 3602998 Fraction of SangerChip 0.1802516 0.2880107 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1914297 0.2788062

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.