Compare segmentations, MSA non-exonic (64kb) (states switched!) vs. Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet)

Histogram of active state (st1) segment lengths

Individual segmentation statistics MSA non-exonic (64kb) (states switched!) Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet) Number of segments State 0: 57 State 1: 72 Total size (bp) State 0: 11680425 State 1: 18317635 Avg. segment length State 0: 204920 State 1: 254412 Median segment length State 0: 146000 State 1: 149000 Min. segment length State 0: 14000 State 1: 22000 Max. segment length State 0: 1000000 State 1: 1353000 Number of segments State 0: 61 State 1: 53 Total size (bp) State 0: 16334939 State 1: 12922947 Avg. segment length State 0: 267786 State 1: 243829 Median segment length State 0: 175999 State 1: 140999 Min. segment length State 0: 16999 State 1: 3999 Max. segment length State 0: 1116999 State 1: 1099999 Intersection st0 st1 total Total bp 8489004 9762289 18251293 Fraction of MSA 0.7267718 0.5329448 0.6084158 Fraction of Affy.H3ac.H3K27me3.Tr50 0.5196839 0.7554228 0.6238076 MSA minus Affy.H3ac.H3K27me3.Tr50 st0 st1 total Total bp 3191421 8555346 11746767 Fraction of MSA 0.2732282 0.4670552 0.3915842 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1953739 0.6620275 0.4014906 Affy.H3ac.H3K27me3.Tr50 minus MSA st0 st1 both Total bp 7845935 3160658 11006593 Fraction of MSA 0.6717166 0.1725473 0.3669102 Fraction of Affy.H3ac.H3K27me3.Tr50 0.4803161 0.2445772 0.3761924 Symmetric difference st0 st1 Total bp 11037356 11716004 Fraction of MSA 0.9449447 0.6396024 Fraction of Affy.H3ac.H3K27me3.Tr50 0.67569 0.9066047

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.