Compare segmentations, Sanger H3ac, HeLa vs. Sanger H3ac, GM06990

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3ac, HeLa Sanger H3ac, GM06990 Number of segments State 0: 64 State 1: 66 Total size (bp) State 0: 14262936 State 1: 15574934 Avg. segment length State 0: 222858 State 1: 235984 Median segment length State 0: 149499 State 1: 167999 Min. segment length State 0: 25999 State 1: 34999 Max. segment length State 0: 878999 State 1: 912999 Number of segments State 0: 69 State 1: 57 Total size (bp) State 0: 17347931 State 1: 12509943 Avg. segment length State 0: 251419 State 1: 219473 Median segment length State 0: 175999 State 1: 127999 Min. segment length State 0: 14999 State 1: 20999 Max. segment length State 0: 1036999 State 1: 737999 Intersection st0 st1 total Total bp 11578819 9824115 21402934 Fraction of GM 0.8118117 0.6307645 0.7173077 Fraction of HeLa 0.6674467 0.7853045 0.7168271 GM minus HeLa st0 st1 total Total bp 2684117 5750819 8434936 Fraction of GM 0.1881883 0.3692355 0.2826923 Fraction of HeLa 0.1547226 0.4596999 0.2825029 HeLa minus GM st0 st1 both Total bp 5769112 2685828 8454940 Fraction of GM 0.4044828 0.1724455 0.2833627 Fraction of HeLa 0.3325533 0.2146955 0.2831729 Symmetric difference st0 st1 Total bp 8453229 8436647 Fraction of GM 0.592671 0.5416811 Fraction of HeLa 0.4872759 0.6743953

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.