Compare segmentations, Sanger H3K4me3, HeLa vs. Sanger H3K4me3, GM06990

Histogram of active state (st1) segment lengths

Individual segmentation statistics Sanger H3K4me3, HeLa Sanger H3K4me3, GM06990 Number of segments State 0: 80 State 1: 66 Total size (bp) State 0: 16425920 State 1: 13407934 Avg. segment length State 0: 205324 State 1: 203151 Median segment length State 0: 129499 State 1: 143999 Min. segment length State 0: 10999 State 1: 7999 Max. segment length State 0: 827999 State 1: 834999 Number of segments State 0: 101 State 1: 82 Total size (bp) State 0: 20489899 State 1: 9367918 Avg. segment length State 0: 202870 State 1: 114243 Median segment length State 0: 122999 State 1: 99999 Min. segment length State 0: 8999 State 1: 13999 Max. segment length State 0: 1038999 State 1: 423999 Intersection st0 st1 total Total bp 15221614 8162931 23384545 Fraction of GM 0.9266826 0.6088135 0.7838258 Fraction of HeLa 0.7428838 0.8713709 0.7831967 GM minus HeLa st0 st1 total Total bp 1204306 5245003 6449309 Fraction of GM 0.07331742 0.3911865 0.2161742 Fraction of HeLa 0.0587756 0.5598899 0.2160007 HeLa minus GM st0 st1 both Total bp 5268285 1204987 6473272 Fraction of GM 0.32073 0.0898712 0.2169774 Fraction of HeLa 0.2571162 0.1286291 0.2168033 Symmetric difference st0 st1 Total bp 6472591 6449990 Fraction of GM 0.3940474 0.4810577 Fraction of HeLa 0.3158918 0.688519

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.