Compare segmentations, Affy RNA, HeLa (51.2kb) vs. Affy, H3ac, H3K27me3 (wavelet), Tr50

Histogram of active state (st1) segment lengths

Individual segmentation statistics Affy RNA, HeLa (51.2kb) Affy, H3ac, H3K27me3 (wavelet), Tr50 Number of segments State 0: 95 State 1: 86 Total size (bp) State 0: 17082205 State 1: 12275464 Avg. segment length State 0: 179813 State 1: 142738 Median segment length State 0: 111399 State 1: 84099 Min. segment length State 0: 10799 State 1: 749 Max. segment length State 0: 1124499 State 1: 680149 Number of segments State 0: 62 State 1: 53 Total size (bp) State 0: 16320938 State 1: 12936947 Avg. segment length State 0: 263241 State 1: 244093 Median segment length State 0: 188999 State 1: 130999 Min. segment length State 0: 16999 State 1: 27999 Max. segment length State 0: 1117999 State 1: 1094999 Intersection st0 st1 total Total bp 13794741 9528701 23323442 Fraction of AffyRnaSignal 0.8075504 0.7762396 0.7944582 Fraction of Affy.H3ac.H3K27me3.Tr50 0.8452174 0.7365494 0.7971677 AffyRnaSignal minus Affy.H3ac.H3K27me3.Tr50 st0 st1 total Total bp 3287464 2746763 6034227 Fraction of AffyRnaSignal 0.1924496 0.2237604 0.2055418 Fraction of Affy.H3ac.H3K27me3.Tr50 0.2014262 0.2123193 0.2062428 Affy.H3ac.H3K27me3.Tr50 minus AffyRnaSignal st0 st1 both Total bp 2526197 3408246 5934443 Fraction of AffyRnaSignal 0.1478847 0.277647 0.2021429 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1547826 0.2634506 0.2028323 Symmetric difference st0 st1 Total bp 5813661 6155009 Fraction of AffyRnaSignal 0.3403343 0.5014074 Fraction of Affy.H3ac.H3K27me3.Tr50 0.3562088 0.4757698

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.