Compare segmentations, Affy RNA, HeLa (51.2kb) (thresh) vs. Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet)

Histogram of active state (st1) segment lengths

Individual segmentation statistics Affy RNA, HeLa (51.2kb) (thresh) Affy(thresh)/H3ac/H3K27me3/MSA non-exonic/Tr50 (wavelet) Number of segments State 0: 95 State 1: 86 Total size (bp) State 0: 17082205 State 1: 12275464 Avg. segment length State 0: 179813 State 1: 142738 Median segment length State 0: 111399 State 1: 84099 Min. segment length State 0: 10799 State 1: 749 Max. segment length State 0: 1124499 State 1: 680149 Number of segments State 0: 61 State 1: 53 Total size (bp) State 0: 16334939 State 1: 12922947 Avg. segment length State 0: 267786 State 1: 243829 Median segment length State 0: 175999 State 1: 140999 Min. segment length State 0: 16999 State 1: 3999 Max. segment length State 0: 1116999 State 1: 1099999 Intersection st0 st1 total Total bp 13676304 9396264 23072568 Fraction of AffyRnaSignal 0.800617 0.7654508 0.7859128 Fraction of Affy.H3ac.H3K27me3.Tr50 0.8372424 0.7270992 0.7885931 AffyRnaSignal minus Affy.H3ac.H3K27me3.Tr50 st0 st1 total Total bp 3405901 2879200 6285101 Fraction of AffyRnaSignal 0.199383 0.2345492 0.2140872 Fraction of Affy.H3ac.H3K27me3.Tr50 0.2085041 0.2227975 0.2148173 Affy.H3ac.H3K27me3.Tr50 minus AffyRnaSignal st0 st1 both Total bp 2658635 3526683 6185318 Fraction of AffyRnaSignal 0.1556377 0.2872953 0.2106883 Fraction of Affy.H3ac.H3K27me3.Tr50 0.1627576 0.2729008 0.2114069 Symmetric difference st0 st1 Total bp 6064536 6405883 Fraction of AffyRnaSignal 0.3550207 0.5218445 Fraction of Affy.H3ac.H3K27me3.Tr50 0.3712616 0.4956983

Enrichment of elements

Plots below indicate the relative enrichment, over the expected value, of various elements in each state, for each dataset. Enrichment values for state 0 are represented with "0"s and "1"s for state 1. Different colors are used for the different datasets.